Test Code HCCGP 275 Gene Cancer NGS Panel
Additional Test Codes
Epic Order Name: HUMAN COMP CANCER GENE PANEL NON BLOOD
Sunquest Order Code: HCCGP
Epic Px Code: LAB8203
Specimen Collection Type
Bone Marrow Aspirate: EDTA (lavender-top) tube, 3.0 mL (Minimum 0.5 mL);
FFPE tissue: 5 to 10 slides, each up to 10 ?m thick plus one additional H&E reference slide with tumor tissue marked.
Minimum Collection Volume
Bone Marrow Aspirate: 0.5 ml;
FFPE: 5 unstained slides + 1 representative H&E
Additional Information / Notes
Detects somatic small nucleotide variations (SNVs) and small insertions/deletions (INDELs) in 275 genes of importance across various types of cancers, including but not limited to breast cancers, lung cancers, colorectal cancers, and melanomas, as well as various hematologic neoplasms. The presence of gene variants in various cancers can serve as a prognostic indicator and can impact a patient’s response to some anti-cancer therapies, making detection of gene variants useful in guiding treatment decisions.
Genes Tested: ABL1, ADA, ANKRD26, ASXL1, ASXL2, ATM, ATRX, BCL6, BCOR, BCORL1, BCR, BIRC3, BLM, BRAF, BRCA1, BRCA2, BRINP3, C17orf97, CALR, CARD11, CBL, CBLB, CBLC, CDKN2A, CEBPA, CHEK2, CREBBP, CRLF2, CSF1R, CSF3R, CTCF, CUX1, DAXX, DDX41, DNM2, DNMT1, DNMT3A, EED, EGFR, ELANE, EP300, ETNK1, ETV6, EZH2, FAM154B, FAM47A, FAS, FBXW7, FLRT2, FLT3, GATA1, GATA2, GJB3, GNAS, HNRNPK, HRAS, IDH1, IDH2, IKZF1, IKZF3, IL7R, JAK1, JAK2, JAK3, KAT6A, KCNA4, KCNK13, KDM6A, KDR, KIT, KLHDC8B, KLHL6, KMT2A, KMT2C, KRAS, LRRC4, LUC7L2, MAP2K1, MLH1, MPL, MSH2, MSH6, MYC, MYD88, NBN, NF1, NOTCH1, NPAT, NPM1, NRAS, NSD1, NTRK3, OR13H1,OR8B12, P2RY2, PAX5, PCDHB1, PDGFRA, PHF6, PML, PMS2, PRAMEF2, PRF1, PRPF40B, PRPF8, PTEN, PTPN11, RAD21, RB1, RELN, RUNX1, SETBP1, SF1, SF3A1, SF3B1, SH2B3, SH2D1A, SMARCB1, SMC1A, SMC3, SRP72, SRSF2, STAG2, STAT3, STXBP2, SUZ12, TAL1, TERC, TERT, TET2, TNFRSF13B, TP53, TPMT, TUBA3C, U2AF1, U2AF2, WAS, WRN, WT1, XPO1, ZRSR2.
Reference Range
An interpretive report will be provided
Critical Value
N/A
Specimen Availability for Add-on Testing
Only for additional CMOL testing; additional sample may be required, see test sample requirements and stability.
Specimen Stability
Blood/Bone Marrow Aspirate: 96 hrs at 4°C;
FFPE: n/a.
Day(s) Performed
9:00 AM – 5:00 PM, Monday through Friday; varies
Performing Lab - Department
Clinical Molecular Oncology Laboratory
CPT Code
81455
LOINC Code
N/A
Clinical Indications
N/A
Interpretation
An interpretive report will be provided
Test Alias
N/A
Rejection Criteria
Frozen, severely hemolyzed, or clotten specimen. FFPE tumor specimen with a tumor percentage < 5 %, or with otherwise inadequate cellular content.