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Test Code HCGNS5 Hepatitis C Virus (HCV) Genotyping Reflex to NS5A Drug Resistance

Clinical Indications

The Hepatitis C Virus (HCV) Genotyping
with NS5A Drug Resistance assay detects NS5 (nonstructural protein
5A) mutations and polymorphisms in HCV
genotypes 1a, 1b, 2 and 3 that are associated with resistance to
direct-acting antivirals: daclatasvir (Daklinza®), elbasvir,
ledipasvir, ombitasvir, pibrentasvir, velpatasvir and other
antiviral combination therapies. The assay is intended to be used
for patients with HCV viral loads who are
being screened prior to treatment with the direct-acting
HCV antivirals, or during treatment with
these antivirals when drug resistance is suspected.

Additional Test Codes

Epic Order Name: HEP C VIRUS (HCV) GENOTYPING W NS5A DRUG
RESISTANCE (aka HCGNS5)
Sunquest Order Code: HCGNS5
Epic Px Code: LAB3064

Specimen Collection Type

Preferred: 2 Pearl-top (PPT) tubes
Acceptable: 2 ACD Yellow or 2
EDTA Lavender-top tubes

Minimum Collection Volume

2.0 mL

Reference Range

Genotypes: 1a, 1b, 2a/2c, 2b, 3, 4, 5, and 6
If reflexed to NS5a Drug Resistance:
Mutations in the NS5A gene will be reported as Resistant/None
Detected. Interpretation of gene mutations and association with
antiviral resistance of the relevant antivirals will be listed.

Critical Value

n/a

Interpretation

HCV infection is the most common
chronic bloodborne infection in the U.S., with approximately 3.2
million people chronically infected and an additional 17,000
(approx.) new infections acquired annually. Multiple drugs approved
to treat HCV target the NS5A protein.
Specific mutations in these genes have been implicated in
resistance to various HCV antiviral drugs
including: daclatasvir (Daklinza®), elbasvir (in
Zepatier®), ledipasvir (in Harvoni®), ombitasvir (in
Viekira Pak®, Viekira XR® and Technivie®), pibrentasvir
(in Mavyret®), and velpatasvir (in Epclusa® and
Vosevi®). Multiple mutations causing resistance to these
FDA-approved HCV inhibitors have been defined, and the levels of
increased resistance for each mutation have been calculated using
HCV replicons or reporter constructs.
Some of the mutations cause resistance to multiple NS5A inhibitors.
Knowledge of these mutations is important in patients since an
incomplete suppression of viral replication by an ineffective drug
combination could prevent a sustained viral response
(“cure”), and could readily support the development of
antiviral drug resistance.

Rejection Criteria

HCV RNA
concentrations too low to allow antiviral resistance testing (less
than 1.0 mL of plasma and/or HCV viral
load less than 1,000 IU/mL), subtypes other than HCV 1a or 1b, 2, and 3, whole blood frozen, specimens
beyond their acceptable length of time from collection as listed in
the specimen stability, or specimen types other than those
listed.

Specimen Availability for Add-on Testing

This test cannot be added on

Specimen Stability

Frozen (preferred): 30 days
Refrigerated: 3 days
Ambient: not acceptable

Day(s) Performed

Varies

Performing Lab- Department

TUKHS-BH-Mail Outs

CPT Code

87902

LOINC Code

N/A

Test Alias

N/A

Additional Information / Notes

Turnaround time: 4-11 business days from receipt of
specimen.