Test Code NS3G1A Hepatitis C Virus (HCV) NS3 Drug Resistance for Genotype 1a
Clinical Indications
The Hepatitis C Virus (HCV) NS3 Drug
Resistance for Genotype 1a assay detects NS3 (nonstructural
protein
3) mutations and polymorphisms in HCV
genotype 1a that are associated with resistance to
direct-acting
protease inhibitors (antivirals) glecaprevir (in Mavyret®),
grazoprevir (in Zepatier®), paritaprevir (in Viekira
Pak/XR® and Technivie®), simeprevir (Olysio®), and
voxilaprevir (in Vosevi®). The assay is intended to be used
for
patients with HCV viral loads who are
being screened prior to treatment with the direct-acting
HCV protease
antivirals, or during
treatment with these antivirals when drug resistance is
suspected.
Additional Test Codes
Epic Order Name: HEP C VIRUS (HCV) NS3
DRUG
RESISTANCE
GENOTYPE 1A
(aka NS3G1A)
Sunquest Order Code: NS3G1A
Epic Px Code: LAB3065
Specimen Collection Type
Preferred: 2 Pearl-top (PPT) tubes
Acceptable: 2 ACD Yellow or 2
EDTA
Lavender-top tubes
Minimum Collection Volume
1.0 mL
Reference Range
Resistant/None Detected
Critical Value
n/a
Interpretation
HCV
infection is the most common
chronic bloodborne infection in the U.S., with approximately
3.2
million people chronically infected and an additional 17,000
(approx.) new infections acquired annually. The HCV NS3 serine protease
plays a critical role in
viral pathogenesis and serves to cleave the viral polyprotein
at
several points, releasing the component viral proteins.
Multiple
mutations causing resistance to FDA-approved HCV protease
inhibitors have been defined, and the levels of increased
resistance for each mutation have been calculated using
HCV replicons
or reporter constructs.
Some of the mutations cause resistance to multiple protease
inhibitors. Knowledge of these mutations is important in
patients
since an incomplete suppression of viral replication by an
ineffective drug combination could prevent a sustained viral
response (“cure”), and could readily support the
development of antiviral drug resistance. In addition to
detection
of drug resistance during treatment, a screen for the protease
Q80K
variant in subtypes 1a is recommended prior to the use of
simeprevir. The manufacturer’s package insert for the
protease inhibitor simeprevir (Olysio®) states as follows:
“Screening patients with HCV
genotype 1a infection for the presence of virus with the NS3
Q80K
polymorphism at baseline is strongly recommended. Alternative
therapy should be considered for patients infected with
HCV genotype 1a
containing the Q80K
polymorphism.”
Rejection Criteria
HCV
RNA
concentrations too low to allow antiviral resistance testing
(less
than 1.0 mL of plasma and/or HCV viral
load less than 1,000 IU/mL), subtypes other than HCV 1a, whole blood frozen,
specimens beyond their
acceptable length of time from collection as listed in the
specimen
stability, or specimen types other than those listed.
Specimen Availability for Add-on Testing
This test cannot be added on
Specimen Stability
Frozen (preferred): 30 days
Refrigerated: 3 days
Ambient: not acceptable
Day(s) Performed
Varies
Performing Lab- Department
TUKHS-BH-Mail Outs
CPT Code
87902
LOINC Code
N/A
Test Alias
N/A
Additional Information / Notes
Turnaround time: 4-11 business days from receipt of
specimen.